Chinese Journal of Chemical Engineering ›› 2021, Vol. 29 ›› Issue (2): 178-184.DOI: 10.1016/j.cjche.2020.12.004
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Jianye Xia, Guan Wang, Meng Fan, Min Chen, Zeyu Wang, Yingping Zhuang
Received:
2020-10-18
Revised:
2020-12-03
Online:
2021-05-15
Published:
2021-02-28
Contact:
Yingping Zhuang
Supported by:
Jianye Xia, Guan Wang, Meng Fan, Min Chen, Zeyu Wang, Yingping Zhuang
通讯作者:
Yingping Zhuang
基金资助:
Jianye Xia, Guan Wang, Meng Fan, Min Chen, Zeyu Wang, Yingping Zhuang. Understanding the scale-up of fermentation processes from the viewpoint of the flow field in bioreactors and the physiological response of strains[J]. Chinese Journal of Chemical Engineering, 2021, 29(2): 178-184.
Jianye Xia, Guan Wang, Meng Fan, Min Chen, Zeyu Wang, Yingping Zhuang. Understanding the scale-up of fermentation processes from the viewpoint of the flow field in bioreactors and the physiological response of strains[J]. 中国化学工程学报, 2021, 29(2): 178-184.
[1] S. Sánchez, A. Chávez, A. Forero, Y. García-Huante, A. Romero, M. Sánchez, D. Rocha, B. Sánchez, M. Ávalos, S. Guzmán-Trampe, R. Rodríguez-Sanoja, E. Langley, B. Ruiz, Carbon source regulation of antibiotic production, J. Antibiotics 63 (8) (2010) 442–459. [2] M. Sauer, D. Porro, D. Mattanovich, P. Branduardi, Microbial production of organic acids: expanding the markets, Trends Biotechnol. 26 (2) (2008) 100–108. [3] J. Nielsen, Production of biopharmaceutical proteins by yeast: Advances through metabolic engineering, Bioengineered 4 (4) (2013) 207–211. [4] F.N. Niyonzima, Production of microbial industrial enzymes, Acta Scientific Microbiol. 2 (12) (2019) 75–89. [5] P. Neubauer, Editorial: Towards faster bioprocess development, Biotechnol. J. 6 (8) (2011) 902–903. [6] N. Milne, P. Thomsen, N. Mølgaard Knudsen, P. Rubaszka, M. Kristensen, I. Borodina, Metabolic engineering of Saccharomyces cerevisiae for the de novo production of psilocybin and related tryptamine derivatives, Metabolic Eng. 60 (2020) 25–36. [7] J. Sáez-Sáez, G. Wang, E.R. Marella, S. Sudarsan, M. Cernuda Pastor, I. Borodina, Engineering the oleaginous yeast Yarrowia lipolytica for high-level resveratrol production, Metabolic Eng. 62(2020) 51–61. [8] J.S. Crater, J.C. Lievense, Scale-up of industrial microbial processes, FEMS Microbiol. Lett. 365 (13) (2018) fny138. [9] F. Delvigne, R. Takors, R. Mudde, W. van Gulik, H. Noorman, Bioprocess scaleup/down as integrative enabling technology: from fluid mechanics to systems biology and beyond, Microb. Biotechnol. 10 (5) (2017) 1267–1274. [10] S. Xu, L. Hoshan, R. Jiang, B. Gupta, E. Brodean, K. O’Neill, T.C. Seamans, J. Bowers, H. Chen, A practical approach in bioreactor scale-up and process transfer using a combination of constant P/V and vvm as the criterion, Biotechnol. Prog. 33 (4) (2017) 1146–1159. [11] J. Xia, G. Wang, J. Lin, Y. Wang, J. Chu, Y. Zhuang, S. Zhang, Advances and practices of bioprocess scale-up, Adv. Biochem. Eng./Biotechnol. 152 (2015) 137–151. [12] B. Li, U. Becken, M. Sha, Tackling the challenge of scalability, G. E. N. 36 (2016) 9. [13] R. Afshar Ghotli, M.S. Shafeeyan, M.R. Abbasi, A.A. Abdul Raman, S. Ibrahim, Macromixing study for various designs of impellers in a stirred vessel, Chem. Eng. Process. -Process Intensification. 148 (2020) 107794. [14] K. Jairamdas, A. Bhalerao, M.B. Machado, S.M. Kresta, Blend time measurement in the confined impeller stirred tank, Chem. Eng. Technol. 42 (8) (2019) 1594–1601. [15] T. Moucha, V. Linek, E. Prokopova, Gas hold-up, mixing time and gas-liquid volumetric mass transfer coefficient of various multiple-impeller configurations: Rushton turbine, pitched blade and techmix impeller and their combinations, Chem. Eng. Sci. 58 (9) (2003) 1839–1846. [16] A.R. Lara, E. Galindo, O.T. Ramirez, L.A. Palomares, Living with heterogeneities in bioreactors, Mol. Biotechnol. 34 (3) (2006) 355–381. [17] A.W. Nienow, On impeller circulation and mixing effectiveness in the turbulent flow regime, Chem. Eng. Sci. 52 (15) (1997) 2557–2565. [18] van ’t Riet K., van der Lans R.G.J.M., in: Edition)Moo-Young M.Editor (Ed.), 2.07 -Mixing in Bioreactor Vessels, in Comprehensive Biotechnology (Second Edition), M. Moo-Young, Editor, Academic Press, Burlington, 2011, pp. 63–80. [19] F. Garcia-Ochoa, E. Gomez, Bioreactor scale-up and oxygen transfer rate in microbial processes: An overview, Biotechnol. Adv. 27 (2) (2009) 153–176. [20] T. Zhang, T. Wang, J. Wang, Analysis and measurement of mass transfer in airlift loop reactors, Chin. J. Chem. Eng. 14 (5) (2006) 604–610. [21] K.G. Clarke, L.D.C. Correia, Oxygen transfer in hydrocarbon–aqueous dispersions and its applicability to alkane bioprocesses: A review, Biochem. Eng. J. 39 (3) (2008) 405–429. [22] Y.S. Liu, J.Y. Wu, K.P. Ho, Characterization of oxygen transfer conditions and their effects on Phaffia rhodozyma growth and carotenoid production in shake-flask cultures, Biochem. Eng. J. 27 (3) (2006) 331–335. [23] H. Djelal, F. Larher, G. Martin, A. Amrane, Effect of the dissolved oxygen on the bioproduction of glycerol and ethanol by Hansenula anomala growing under salt stress conditions, J Biotechnol. 125 (1) (2006) 95–103. [24] M. Funke, A. Buchenauer, W. Mokwa, S. Kluge, L. Hein, C. Müller, F. Kensy, J. Büchs, Bioprocess control in microscale: scalable fermentations in disposable and user-friendly microfluidic systems, Microb. Cell Fact. 9 (1) (2010) 86. [25] R. Puskeiler, K. Kaufmann, D. Weuster-Botz, Development, parallelization, and automation of a gas-inducing milliliter-scale bioreactor for high-throughput bioprocess design (HTBD), Biotechnol. Bioeng. 89 (5) (2005) 512–523. [26] B.H. Junker, Scale-up methodologies for Escherichia coli and yeast fermentation processes, J. Biosci. Bioeng. 97 (6) (2004) 347–364. [27] C. Li, J.Y. Xia, J. Chu, Y.H. Wang, Y.P. Zhuang, S.L. Zhang, CFD analysis of the turbulent flow in baffled shake flasks, Biochem. Eng. J. 70 (2013) 140–150. [28] J.Y. Xia, Y.H. Wang, S.L. Zhang, N. Chen, P. Yin, Y.P. Zhuang, J. Chu, Fluid dynamics investigation of variant impeller combinations by simulation and fermentation experiment, Biochem. Eng. J. 43 (3) (2009) 252–260. [29] P. Yin, Y.H. Wang, S.L. Zhang, J. Chu, Y.P. Zhuang, N. Chen, X.F. Li, Y.B. Wu, Effect of mycelial morphology on bioreactor performance and avermectin production of Streptomyces avermitilis in submerged cultivations, J. Chin. Inst. Chem. Eng, 39 (6) (2008) 609–615. [30] R. Gómez, I. Schnabel, J. Garrido, Pellet growth and citric acid yield of Aspergillus niger 110, Enzyme Microb. Technol. 10 (3) (1988) 188–191. [31] L. Veiter, V. Rajamanickam, C. Herwig, The filamentous fungal pellet— relationship between morphology and productivity, Appl. Microbiol. Biotechnol. 102 (7) (2018) 2997–3006. [32] E.M. Rodríguez Porcel, J.L. Casas López, J.A. Sánchez Pérez, J.M. Fernández Sevilla, Y. Chisti, Effects of pellet morphology on broth rheology in fermentations of Aspergillus terreus, Biochem. Eng. J. 26 (2) (2005) 139–144. [33] A. Hille, T.R. Neu, D.C. Hempel, H. Horn, Oxygen profiles and biomass distribution in biopellets of Aspergillus niger, Biotechnol. Bioeng. 92 (5) (2005) 614–1423. [34] J.Y. Xia, S.J. Wang, S.L. Zhang, J.J. Zhong, Computational investigation of fluid dynamics in a recently developed centrifugal impeller bioreactor, Biochem. Eng. J. 38 (3) (2008) 406–413. [35] H. Wang, J. Xia, Z. Zheng, Y.P. Zhuang, X. Yi, D. Zhang, P. Wang, Hydrodynamic investigation of a novel shear-generating device for the measurement of anchorage-dependent cell adhesion intensity, Bioprocess Biosyst. Eng. 41 (9) (2018) 1371–1382. [36] C. Li, X. Teng, H. Peng, X. Yi, Y. Zhuang, S. Zhang, J. Xia, Novel scale-up strategy based on three-dimensional shear space for animal cell culture, Chem. Eng. Sci. 212 (2020) 115329. [37] Y. Liu, Z.-J. Wang, J.-y. Xia, C. Haringa, Y.-p. Liu, J. Chu, Y.-P. Zhuang, S.-L. Zhang, Application of Euler-Lagrange CFD for quantitative evaluating the effect of shear force on Carthamus tinctorius L. cell in a stirred tank bioreactor, Biochem. Eng. J. 114 (2016) 209–217. [38] S.B. Pawar, Computational fluid dynamics (CFD) analysis of airlift bioreactor: effect of draft tube configurations on hydrodynamics, cell suspension, and shear rate, Bioprocess. Biosyst. Eng. 41 (1) (2018) 31–45. [39] D. Visser, G.A. van Zuylen, J.C. van Dam, M.R. Eman, A. Pröll, C. Ras, L. Wu, W.M. van Gulik, J.J. Heijnen, Analysis of in vivo kinetics of glycolysis in aerobic Saccharomyces cerevisiae by application of glucose and ethanol pulses, Biotechnol. Bioeng. 88 (2) (2004) 157–167. [40] M.R. Mashego, W.M. van Gulik, J.L. Vinke, D. Visser, J.J. Heijnen, In vivo kinetics with rapid perturbation experiments in Saccharomyces cerevisiae using a second-generation BioScope, Metab. Eng. 8 (4) (2006) 370–383. [41] H.J. Noorman, J.J. Heijnen, Biochemical engineering’s grand adventure, Chem. Eng. Sci. 170 (2017) 677–693. [42] C.J. Hewitt, A.W. Nienow, The scale up of microbial batch and fed-batch fermentation processes, Adv. Appl. Microbiol. 62 (2007) 105–135. [43] F. Bylund, E. Collet, S.-O. Enfors, G. Larsson, Substrate gradient formation in the large-scale bioreactor lowers cell yield and increases by-product formation, Bioprocess. Eng. 18 (3) (1998) 171–180. [44] F. Käß, S. Junne, P. Neubauer, W. Wiechert, M. Oldiges, Process inhomogeneity leads to rapid side product turnover in cultivation of Corynebacterium glutamicum, Microb. Cell Fact. 13 (1) (2014) 1–11. [45] G. Wang, W.J. Tang, J.Y. Xia, J. Chu, H. Noorman, W.M. van Gulik, Integration of microbial kinetics and fluid dynamics toward model-driven scale-up of industrial bioprocesses, Eng. Life Sci. 15 (1) (2015) 20–29. [46] F. Delvigne, H. Noorman, Scale-up/Scale-down of microbial bioprocesses: a modern light on an old issue, Microb. Biotechnol. 10 (4) (2017) 685–687. [47] P. Neubauer, S. Junne, Scale-down simulators for metabolic analysis of largescale bioprocesses, Curr. Opin. Biotechnol. 21 (1) (2010) 114–121. [48] A. Lemoine, N. Maya Martinez-Iturralde, R. Spann, P. Neubauer, S. Junne, Response of Corynebacterium glutamicum exposed to oscillating cultivation conditions in a two-and a novel three-compartment scale-down bioreactor, Biotechnol. Bioeng. 112 (6) (2015) 1220–1231. [49] S. Wang, P. Liu, W. Shu, C. Li, H. Li, S. Liu, J. Xia, H. Noorman, Dynamic response of Aspergillus niger to single pulses of glucose with high and low concentrations, Bioresour. Bioprocess. 6 (1) (2019) 16. [50] F. Käß, I. Hariskos, A. Michel, H.J. Brandt, R. Spann, S. Junne, W. Wiechert, P. Neubauer, M. Oldiges, Assessment of robustness against dissolved oxygen/substrate oscillations for C. glutamicum DM1933 in twocompartment bioreactor, Bioprocess Biosyst. Eng. 37 (6) (2014) 1151–1162. [51] S. Junne, A. Klingner, J. Kabisch, T. Schweder, P. Neubauer, A two-compartment bioreactor system made of commercial parts for bioprocess scale-down studies: impact of oscillations on Bacillus subtilis fed-batch cultivations, Biotechnol. J. 6 (8) (2011) 1009–1017. [52] S.O. Enfors, M. Jahic, A. Rozkov, B. Xu, M. Hecker, B. Jurgen, E. Kruger, T. Schweder, G. Hamer, D. O’Beirne, N. Noisommit-Rizzi, M. Reuss, L. Boone, C. Hewitt, C. McFarlane, A. Nienow, T. Kovacs, C. Tragardh, L. Fuchs, J. Revstedt, P.C. Friberg, B. Hjertager, G. Blomsten, H. Skogman, S. Hjort, F. Hoeks, H.Y. Lin, P. Neubauer, R. van der Lans, K. Luyben, P. Vrabel, A. Manelius, Physiological responses to mixing in large scale bioreactors, J. Biotechnol. 85 (2) (2001) 175–185. [53] C. Li, W. Shu, S. Wang, P. Liu, Y. Zhuang, S. Zhang, J. Xia, Dynamic metabolic response of Aspergillus niger to glucose perturbation: evidence of regulatory mechanism for reduced glucoamylase production, J. Biotechnol. 287 (2018) 28–40. [54] P.A. Saa, L.K. Nielsen, Formulation, construction and analysis of kinetic models of metabolism: A review of modelling frameworks, Biotechnol. Adv. 35 (8) (2017) 981–1003. [55] J. Almquist, M. Cvijovic, V. Hatzimanikatis, J. Nielsen, M. Jirstrand, Kinetic models in industrial biotechnology -Improving cell factory performance, Metab. Eng. 24 (2014) 38–60. [56] L. Wu, M.R. Mashego, A.M. Proell, J.L. Vinke, C. Ras, J. van Dam, W.A. van Winden, W.M. van Gulik, J.J. Heijnen, In vivo kinetics of primary metabolism in Saccharomyces cerevisiae studied through prolonged chemostat cultivation, Metab. Eng. 8 (2) (2006) 160–171. [57] J.H. Park, S.Y. Lee, T.Y. Kim, H.U. Kim, Application of systems biology for bioprocess development, Trends Biotechnol. 26 (8) (2008) 404–412. [58] D. McCloskey, B.Ø. Palsson, A.M. Feist, Basic and applied uses of genome-scale metabolic network reconstructions of Escherichia coli, Mol. Syst. Biol. 9 (1) (2013) 661. [59] J.S. Edwards, B.O. Palsson, Systems properties of the Haemophilus influenzaeRd metabolic genotype, J. Biol. Chem. 274 (25) (1999) 17410–17416. [60] M.A. Garcia-Albornoz, J. Nielsen, Application of genome-scale metabolic models in metabolic engineering, Ind. Biotechnol. 9 (4) (2013) 203–214. [61] C. Bro, B. Regenberg, J. Förster, J. Nielsen, In silico aided metabolic engineering of Saccharomyces cerevisiae for improved bioethanol production, Metab. Eng. 8 (2) (2006) 102–111. [62] J.L. Hjersted, M.A. Henson, R. Mahadevan, Genome-scale analysis of Saccharomyces cerevisiae metabolism and ethanol production in fed-batch culture, Biotechnol. Bioeng. 97 (5) (2007) 1190–1204. [63] J.E. Yang, S.J. Park, W.J. Kim, H.J. Kim, B.J. Kim, H. Lee, J. Shin, S.Y. Lee, One-step fermentative production of aromatic polyesters from glucose by metabolically engineered Escherichia coli strains, Nat. Commun. 9 (1) (2018) 1–10. [64] E. Belda, A. Sekowska, F. Le Fèvre, A. Morgat, D. Mornico, C. Ouzounis, D. Vallenet, C. Medigue, A. Danchin, An updated metabolic view of the Bacillus subtilis 168 genome. Microbiology 159(Pt_4) (2013) 757–770. [65] R. Agren, J.M. Otero, J. Nielsen, Genome-scale modeling enables metabolic engineering of Saccharomyces cerevisiae for succinic acid production, J. Ind. Microbiol. Biotechnol. 40 (7) (2013) 735–747. [66] W. Tang, A.T. Deshmukh, C. Haringa, G. Wang, W. van Gulik, W. van Winden, M. Reuss,J.J.Heijnen,J.Xia,J.Chu,H.J.Noorman,A9-poolmetabolicstructuredkinetic model describing days to seconds dynamics of growth and product formation by Penicillium chrysogenum, Biotechnol. Bioeng. 114 (8) (2017) 1733–1743. [67] C. Haringa, H.J. Noorman, R.F. Mudde, Lagrangian modeling of hydrodynamic–kinetic interactions in (bio)chemical reactors: Practical implementation and setup guidelines, Chem. Eng. Sci. 157 (2017) 159–168. [68] European Commission, Bioprocess scale-up strategy based on integration of microbial physiology and fluid dynamics, http://cordis.europa.eu/project/rcn/31093_en.html. [69] H. Noorman, An industrial perspective on bioreactor scale-down: What we can learn from combined large-scale bioprocess and model fluid studies, Biotechnol. J. 6 (8) (2011) 934–943. [70] A.R. Lara, L.A. Palomares, O.T. Scale-down Ramirez, Simulating large-scale cultures in the laboratory, in Industrial Biotechnology: Products and processes, Wiley-VCH Verlag GmbH & Co. KGaA, Boschstr, Weinheim, Germany, 2016. [71] G. Wang, J. Chu, H. Noorman, J. Xia, W. Tang, Y. Zhuang, S. Zhang, Prelude to rational scale-up of penicillin production: A scale-down study, Appl. Microbiol. Biotechnol. 98 (6) (2014) 2359–2369. |
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