SCI和EI收录∣中国化工学会会刊

中国化学工程学报 ›› 2024, Vol. 70 ›› Issue (6): 251-260.DOI: 10.1016/j.cjche.2024.03.016

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Real-time model correction using Kalman filter for Raman-controlled cell culture processes

Xiaoxiao Dong1, Zhuohong He2, Xu Yan1,2, Dong Gao2, Jingyu Jiao2, Yan Sun2, Haibin Wang2, Haibin Qu1   

  1. 1. Pharmaceutical Informatics Institute, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, China;
    2. Hisun Biopharmaceutical Co. Ltd., Hangzhou 311404, China
  • 收稿日期:2024-01-12 修回日期:2024-02-26 出版日期:2024-06-28 发布日期:2024-08-05
  • 通讯作者: Haibin Qu,E-mail:quhb@zju.edu.cn
  • 基金资助:
    This work was supported by the Key Research and Development Program of Zhejiang Province, China (2023C03116).

Real-time model correction using Kalman filter for Raman-controlled cell culture processes

Xiaoxiao Dong1, Zhuohong He2, Xu Yan1,2, Dong Gao2, Jingyu Jiao2, Yan Sun2, Haibin Wang2, Haibin Qu1   

  1. 1. Pharmaceutical Informatics Institute, College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, China;
    2. Hisun Biopharmaceutical Co. Ltd., Hangzhou 311404, China
  • Received:2024-01-12 Revised:2024-02-26 Online:2024-06-28 Published:2024-08-05
  • Contact: Haibin Qu,E-mail:quhb@zju.edu.cn
  • Supported by:
    This work was supported by the Key Research and Development Program of Zhejiang Province, China (2023C03116).

摘要: Raman spectroscopy has found extensive use in monitoring and controlling cell culture processes. In this context, the prediction accuracy of Raman-based models is of paramount importance. However, models established with data from manually fed-batch cultures often exhibit poor performance in Raman-controlled cultures. Thus, there is a need for effective methods to rectify these models. The objective of this paper is to investigate the efficacy of Kalman filter (KF) algorithm in correcting Raman-based models during cell culture. Initially, partial least squares (PLS) models for different components were constructed using data from manually fed-batch cultures, and the predictive performance of these models was compared. Subsequently, various correction methods including the PLS-KF-KF method proposed in this study were employed to refine the PLS models. Finally, a case study involving the auto-control of glucose concentration demonstrated the application of optimal model correction method. The results indicated that the original PLS models exhibited differential performance between manually fed-batch cultures and Raman-controlled cultures. For glucose, the root mean square error of prediction (RMSEP) of manually fed-batch culture and Raman-controlled culture was 0.23 and 0.40 g·L-1. With the implementation of model correction methods, there was a significant improvement in model performance within Raman-controlled cultures. The RMSEP for glucose from updating-PLS, KF-PLS, and PLS-KF-KF was 0.38, 0.36 and 0.17 g·L-1, respectively. Notably, the proposed PLS-KF-KF model correction method was found to be more effective and stable, playing a vital role in the automated nutrient feeding of cell cultures.

关键词: Raman spectroscopy, Model correction, Algorithm, Model-predictive control, Bioprocess

Abstract: Raman spectroscopy has found extensive use in monitoring and controlling cell culture processes. In this context, the prediction accuracy of Raman-based models is of paramount importance. However, models established with data from manually fed-batch cultures often exhibit poor performance in Raman-controlled cultures. Thus, there is a need for effective methods to rectify these models. The objective of this paper is to investigate the efficacy of Kalman filter (KF) algorithm in correcting Raman-based models during cell culture. Initially, partial least squares (PLS) models for different components were constructed using data from manually fed-batch cultures, and the predictive performance of these models was compared. Subsequently, various correction methods including the PLS-KF-KF method proposed in this study were employed to refine the PLS models. Finally, a case study involving the auto-control of glucose concentration demonstrated the application of optimal model correction method. The results indicated that the original PLS models exhibited differential performance between manually fed-batch cultures and Raman-controlled cultures. For glucose, the root mean square error of prediction (RMSEP) of manually fed-batch culture and Raman-controlled culture was 0.23 and 0.40 g·L-1. With the implementation of model correction methods, there was a significant improvement in model performance within Raman-controlled cultures. The RMSEP for glucose from updating-PLS, KF-PLS, and PLS-KF-KF was 0.38, 0.36 and 0.17 g·L-1, respectively. Notably, the proposed PLS-KF-KF model correction method was found to be more effective and stable, playing a vital role in the automated nutrient feeding of cell cultures.

Key words: Raman spectroscopy, Model correction, Algorithm, Model-predictive control, Bioprocess